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sPlotOpen – An environmentally balanced, open-access, global dataset of vegetation plots

  • Francesco Maria Sabatini*
  • , Jonathan Lenoir
  • , Tarek Hattab
  • , Elise Aimee Arnst
  • , Milan Chytrý
  • , Jürgen Dengler
  • , Patrice De Ruffray
  • , Stephan M. Hennekens
  • , Ute Jandt
  • , Florian Jansen
  • , Borja Jiménez-Alfaro
  • , Jens Kattge
  • , Aurora Levesley
  • , Valério D. Pillar
  • , Oliver Purschke
  • , Brody Sandel
  • , Fahmida Sultana
  • , Tsipe Aavik
  • , Svetlana Aćić
  • , Alicia T.R. Acosta
  • Emiliano Agrillo, Miguel Alvarez, Iva Apostolova, Mohammed A.S. Arfin Khan, Luzmila Arroyo, Fabio Attorre, Isabelle Aubin, Arindam Banerjee, Marijn Bauters, Yves Bergeron, Erwin Bergmeier, Idoia Biurrun, Anne D. Bjorkman, Gianmaria Bonari, Viktoria Bondareva, Jörg Brunet, Andraž Čarni, Laura Casella, Luis Cayuela, Tomáš Černý, Victor Chepinoga, János Csiky, Renata Ćušterevska, Els De Bie, André Luis de Gasper, Michele De Sanctis, Panayotis Dimopoulos, Jiri Dolezal, Tetiana Dziuba, Mohamed Abd El Rouf Mousa El-Sheikh, Brian Enquist, Jörg Ewald, Farideh Fazayeli, Richard Field, Manfred Finckh, Sophie Gachet, Antonio Galán-de-Mera, Emmanuel Garbolino, Hamid Gholizadeh, Melisa Giorgis, Valentin Golub, Inger Greve Alsos, John Arvid Grytnes, Gregory Richard Guerin, Alvaro G. Gutiérrez, Sylvia Haider, Mohamed Z. Hatim, Bruno Hérault, Guillermo Hinojos Mendoza, Norbert Hölzel, Jürgen Homeier, Wannes Hubau, Adrian Indreica, John A.M. Janssen, Birgit Jedrzejek, Anke Jentsch, Norbert Jürgens, Zygmunt Kącki, Jutta Kapfer, Dirk Nikolaus Karger, Ali Kavgacı, Elizabeth Kearsley, Michael Kessler, Larisa Khanina, Timothy Killeen, Andrey Korolyuk, Holger Kreft, Hjalmar S. Kühl, Anna Kuzemko, Flavia Landucci, Attila Lengyel, Frederic Lens, Débora Vanessa Lingner, Hongyan Liu, Tatiana Lysenko, Miguel D. Mahecha, Corrado Marcenò, Vasiliy Martynenko, Jesper Erenskjold Moeslund, Abel Monteagudo Mendoza, Ladislav Mucina, Jonas V. Müller, Jérôme Munzinger, Alireza Naqinezhad, Jalil Noroozi, Arkadiusz Nowak, Viktor Onyshchenko, Gerhard E. Overbeck, Meelis Pärtel, Aníbal Pauchard, Robert K. Peet, Josep Peñuelas, Aaron Pérez-Haase, Tomáš Peterka, Petr Petřík, Gwendolyn Peyre, Oliver L. Phillips, Vadim Prokhorov, Valerijus Rašomavičius, Rasmus Revermann, Gonzalo Rivas-Torres, John S. Rodwell, Eszter Ruprecht, Solvita Rūsiņa, Cyrus Samimi, Marco Schmidt, Franziska Schrodt, Hanhuai Shan, Pavel Shirokikh, Jozef Šibík, Urban Šilc, Petr Sklenář, Željko Škvorc, Ben Sparrow, Marta Gaia Sperandii, Zvjezdana Stančić, Jens Christian Svenning, Zhiyao Tang, Cindy Q. Tang, Ioannis Tsiripidis, Kim André Vanselow, Rodolfo Vásquez Martínez, Kiril Vassilev, Eduardo Vélez-Martin, Roberto Venanzoni, Alexander Christian Vibrans, Cyrille Violle, Risto Virtanen, Henrik von Wehrden, Viktoria Wagner, Donald A. Walker, Donald M. Waller, Hua Feng Wang, Karsten Wesche, Timothy J.S. Whitfeld, Wolfgang Willner, Susan K. Wiser, Thomas Wohlgemuth, Sergey Yamalov, Martin Zobel, Helge Bruelheide
*Corresponding author for this work
  • German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig
  • Martin Luther University Halle-Wittenberg
  • Université de Picardie Jules Verne
  • CNRS)
  • Manaaki Whenua - Landcare Research
  • Masaryk University
  • Zurich University of Applied Sciences (ZHAW)
  • University of Bayreuth
  • Université de Strasbourg
  • Wageningen University & Research
  • Universität Rostock
  • University of Oviedo
  • Max Planck Institute for Biogeochemistry
  • University of Leeds
  • Universidade Federal do Rio Grande do Sul
  • Santa Clara University
  • Shahjalal University of Science & Technology
  • University of Tartu
  • University of Belgrade
  • Roma Tre University
  • ISPRA - Italian National Institute for Environmental Protection and Research
  • Universität Bonn
  • Bulgarian Academy of Sciences
  • Universidad Autónoma Gabriel Rene Moreno
  • Université di Roma La Sapienza
  • Great Lakes Forestry Centre
  • University of Illinois Urbana Champaign
  • Ghent University
  • Université du Québec en Abitibi-Témiscamingue
  • Georg-August-Universität Göttingen
  • University of the Basque Country (UPV/EHU)
  • University of Gothenburg
  • Free University of Bozen-Bolzano
  • Russian Academy of Sciences
  • Swedish University of Agricultural Sciences
  • Scientific Research Centre of the Slovenian Academy of Sciences and Arts
  • University of Nova Gorica
  • Universidad Rey Juan Carlos
  • Czech University of Life Sciences Prague
  • Central Siberian Botanical Garden SB RAS
  • Medical School University of Pécs
  • SS Cyril and Methodius University
  • Research Institute for Nature and Forest (INBO)
  • Universidade Regional de Blumenau
  • University of Patras
  • Czech Academy of Sciences
  • M.G. Kholodny Institute of Botany
  • College of Sciences
  • Damanhour University
  • University of Arizona
  • Weihenstephan-Triesdorf University of Applied Sciences
  • Alphabet Inc.
  • University of Minnesota-Twin Cities
  • University of Nottingham
  • University of Hamburg
  • Avignon Université
  • CEU Universities
  • Universidad Privada Antonio Guillermo Urrelo
  • Herbario AQP
  • CS
  • University of Mazandaran
  • Instituto Multidisciplinario de Biología Vegetal
  • UiT the Arctic University of Norway
  • University of Bergen
  • University of Adelaide
  • Universidad de Chile
  • Tanta University
  • UPR Forêts et Sociétés
  • Institut national polytechnique Félix Houphouët-Boigny
  • ASES Ecological and Sustainable Services
  • University of Münster
  • Royal Museum for Central Africa
  • Transilvania University of Brasov
  • University of Wroclaw
  • Norwegian Institute of Bioeconomy Research
  • Snow and Landscape Research WSL
  • Karabuk University
  • University of Zurich
  • Institute of Mathematical Problems of Biology of RAS
  • Max Planck Institute for Evolutionary Anthropology
  • Institute of Ecology and Botany
  • Naturalis Biodiversity Center
  • Institute of Biology Leiden
  • Peking University
  • Tobolsk complex scientific station of Ural Branch RAS
  • Leipzig University
  • Ufa Institute of Biology of the Russian Academy of Sciences
  • Aarhus University
  • Oxapampa
  • Universidad Nacional San Antonio Abad del Cusco
  • Murdoch University
  • Stellenbosch University
  • Royal Botanic Gardens, Kew
  • University of Vienna
  • Polish Academy of Sciences
  • University of Opole
  • University of Concepción
  • Instituto de Ecología y Biodiversidad
  • University of North Carolina at Chapel Hill
  • CSIC
  • CREAF
  • The University of Vic - Central University of Catalonia
  • University of Barcelona
  • Universidad de los Andes Colombia
  • Kazan Federal University
  • Nature Research Centre
  • Namibia University of Science and Technology
  • Independent Researcher
  • Babes Bolyai University
  • University of Latvia
  • Palmengarten
  • Microsoft Corporation
  • Institute of Botany Slovak Academy of Sciences
  • Charles University
  • University of Zagreb, Faculty of Forestry and Wood Technology
  • Centro de Investigaciones sobre Desertificación
  • University of Zagreb
  • Yunnan University
  • Aristotle University of Thessaloniki
  • Friedrich-Alexander-Universität Erlangen-Nürnberg
  • Ilex Consultoria Científica
  • Université di Perugia
  • University of Oulu
  • Helmholtz Centre for Environmental Research
  • Leuphana University of Lüneburg
  • University of Alberta
  • University of Alaska Fairbanks
  • University of Wisconsin-Madison
  • Hainan University
  • Senckenberg Museum of Natural History Görlitz
  • Technische Universität Dresden

Research output: Contribution to journalArticlepeer-review

109 Scopus citations

Abstract

Motivation: Assessing biodiversity status and trends in plant communities is critical for understanding, quantifying and predicting the effects of global change on ecosystems. Vegetation plots record the occurrence or abundance of all plant species co-occurring within delimited local areas. This allows species absences to be inferred, information seldom provided by existing global plant datasets. Although many vegetation plots have been recorded, most are not available to the global research community. A recent initiative, called ‘sPlot’, compiled the first global vegetation plot database, and continues to grow and curate it. The sPlot database, however, is extremely unbalanced spatially and environmentally, and is not open-access. Here, we address both these issues by (a) resampling the vegetation plots using several environmental variables as sampling strata and (b) securing permission from data holders of 105 local-to-regional datasets to openly release data. We thus present sPlotOpen, the largest open-access dataset of vegetation plots ever released. sPlotOpen can be used to explore global diversity at the plant community level, as ground truth data in remote sensing applications, or as a baseline for biodiversity monitoring. Main types of variable contained: Vegetation plots (n = 95,104) recording cover or abundance of naturally co-occurring vascular plant species within delimited areas. sPlotOpen contains three partially overlapping resampled datasets (c. 50,000 plots each), to be used as replicates in global analyses. Besides geographical location, date, plot size, biome, elevation, slope, aspect, vegetation type, naturalness, coverage of various vegetation layers, and source dataset, plot-level data also include community-weighted means and variances of 18 plant functional traits from the TRY Plant Trait Database. Spatial location and grain: Global, 0.01–40,000 m². Time period and grain: 1888–2015, recording dates. Major taxa and level of measurement: 42,677 vascular plant taxa, plot-level records. Software format: Three main matrices (.csv), relationally linked.

Original languageEnglish
Pages (from-to)1740-1764
Number of pages25
JournalGlobal Ecology and Biogeography
Volume30
Issue number9
DOIs
StatePublished - Sep 2021

Keywords

  • big data
  • biodiversity
  • biogeography
  • database
  • functional traits
  • macroecology
  • vascular plants
  • vegetation plots

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