TY - JOUR
T1 - CrossMoDA 2021 challenge
T2 - Benchmark of cross-modality domain adaptation techniques for vestibular schwannoma and cochlea segmentation
AU - Dorent, Reuben
AU - Kujawa, Aaron
AU - Ivory, Marina
AU - Bakas, Spyridon
AU - Rieke, Nicola
AU - Joutard, Samuel
AU - Glocker, Ben
AU - Cardoso, Jorge
AU - Modat, Marc
AU - Batmanghelich, Kayhan
AU - Belkov, Arseniy
AU - Calisto, Maria Baldeon
AU - Choi, Jae Won
AU - Dawant, Benoit M.
AU - Dong, Hexin
AU - Escalera, Sergio
AU - Fan, Yubo
AU - Hansen, Lasse
AU - Heinrich, Mattias P.
AU - Joshi, Smriti
AU - Kashtanova, Victoriya
AU - Kim, Hyeon Gyu
AU - Kondo, Satoshi
AU - Kruse, Christian N.
AU - Lai-Yuen, Susana K.
AU - Li, Hao
AU - Liu, Han
AU - Ly, Buntheng
AU - Oguz, Ipek
AU - Shin, Hyungseob
AU - Shirokikh, Boris
AU - Su, Zixian
AU - Wang, Guotai
AU - Wu, Jianghao
AU - Xu, Yanwu
AU - Yao, Kai
AU - Zhang, Li
AU - Ourselin, Sébastien
AU - Shapey, Jonathan
AU - Vercauteren, Tom
N1 - Crown Copyright © 2022. Published by Elsevier B.V. All rights reserved.
PY - 2023/1
Y1 - 2023/1
N2 - Domain Adaptation (DA) has recently been of strong interest in the medical imaging community. While a large variety of DA techniques have been proposed for image segmentation, most of these techniques have been validated either on private datasets or on small publicly available datasets. Moreover, these datasets mostly addressed single-class problems. To tackle these limitations, the Cross-Modality Domain Adaptation (crossMoDA) challenge was organised in conjunction with the 24th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2021). CrossMoDA is the first large and multi-class benchmark for unsupervised cross-modality Domain Adaptation. The goal of the challenge is to segment two key brain structures involved in the follow-up and treatment planning of vestibular schwannoma (VS): the VS and the cochleas. Currently, the diagnosis and surveillance in patients with VS are commonly performed using contrast-enhanced T1 (ceT1) MR imaging. However, there is growing interest in using non-contrast imaging sequences such as high-resolution T2 (hrT2) imaging. For this reason, we established an unsupervised cross-modality segmentation benchmark. The training dataset provides annotated ceT1 scans (N=105) and unpaired non-annotated hrT2 scans (N=105). The aim was to automatically perform unilateral VS and bilateral cochlea segmentation on hrT2 scans as provided in the testing set (N=137). This problem is particularly challenging given the large intensity distribution gap across the modalities and the small volume of the structures. A total of 55 teams from 16 countries submitted predictions to the validation leaderboard. Among them, 16 teams from 9 different countries submitted their algorithm for the evaluation phase. The level of performance reached by the top-performing teams is strikingly high (best median Dice score — VS: 88.4%; Cochleas: 85.7%) and close to full supervision (median Dice score — VS: 92.5%; Cochleas: 87.7%). All top-performing methods made use of an image-to-image translation approach to transform the source-domain images into pseudo-target-domain images. A segmentation network was then trained using these generated images and the manual annotations provided for the source image.
AB - Domain Adaptation (DA) has recently been of strong interest in the medical imaging community. While a large variety of DA techniques have been proposed for image segmentation, most of these techniques have been validated either on private datasets or on small publicly available datasets. Moreover, these datasets mostly addressed single-class problems. To tackle these limitations, the Cross-Modality Domain Adaptation (crossMoDA) challenge was organised in conjunction with the 24th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2021). CrossMoDA is the first large and multi-class benchmark for unsupervised cross-modality Domain Adaptation. The goal of the challenge is to segment two key brain structures involved in the follow-up and treatment planning of vestibular schwannoma (VS): the VS and the cochleas. Currently, the diagnosis and surveillance in patients with VS are commonly performed using contrast-enhanced T1 (ceT1) MR imaging. However, there is growing interest in using non-contrast imaging sequences such as high-resolution T2 (hrT2) imaging. For this reason, we established an unsupervised cross-modality segmentation benchmark. The training dataset provides annotated ceT1 scans (N=105) and unpaired non-annotated hrT2 scans (N=105). The aim was to automatically perform unilateral VS and bilateral cochlea segmentation on hrT2 scans as provided in the testing set (N=137). This problem is particularly challenging given the large intensity distribution gap across the modalities and the small volume of the structures. A total of 55 teams from 16 countries submitted predictions to the validation leaderboard. Among them, 16 teams from 9 different countries submitted their algorithm for the evaluation phase. The level of performance reached by the top-performing teams is strikingly high (best median Dice score — VS: 88.4%; Cochleas: 85.7%) and close to full supervision (median Dice score — VS: 92.5%; Cochleas: 87.7%). All top-performing methods made use of an image-to-image translation approach to transform the source-domain images into pseudo-target-domain images. A segmentation network was then trained using these generated images and the manual annotations provided for the source image.
KW - Domain adaptation
KW - Segmentation
KW - Vestibular schwannoma
KW - Humans
KW - Neuroma, Acoustic/diagnostic imaging
UR - http://www.scopus.com/inward/record.url?scp=85140305038&partnerID=8YFLogxK
U2 - 10.1016/j.media.2022.102628
DO - 10.1016/j.media.2022.102628
M3 - Artículo
C2 - 36283200
AN - SCOPUS:85140305038
SN - 1361-8415
VL - 83
JO - Medical Image Analysis
JF - Medical Image Analysis
M1 - 102628
ER -