Retrained classification of tyrosinase inhibitors and "In Silico" potency estimation by using atom-type linear indices: A powerful tool for speed up the discovery of leads

Gerardo M. Casañola-Martín, Ramón García-Domenech, Mahmud Tareq Hassan Khan, Francisco Torrens, Huong Le-Thi-Thu, Antonio Rescigno, Yovani Marrero-Ponce, Concepción Abad

Producción científica: Capítulo del libro/informe/acta de congresoCapítulorevisión exhaustiva

Resumen

In this paper, the authors present an effort to increase the applicability domain (AD) by means of retraining models using a database of 701 great dissimilar molecules presenting anti-tyrosinase activity and 728 drugs with other uses. Atom-based linear indices and best subset linear discriminant analysis (LDA) were used to develop individual classification models. Eighteen individual classification-based QSAR models for the tyrosinase inhibitory activity were obtained with global accuracy varying from 88.15-91.60% in the training set and values of Matthews correlation coefficients (C) varying from 0.76-0.82. The external validation set shows globally classifications above 85.99% and 0.72 for C. All individual models were validated and fulfilled by OECD principles. A brief analysis of AD for the training set of 478 compounds and the new active compounds included in the re-training was carried out. Various assembled multiclassifier systems contained eighteen models using different selection criterions were obtained, which provide possibility of select the best strategy for particular problem. The various assembled multiclassifier systems also estimated the potency of active identified compounds. Eighteen validated potency models by OECD principles were used.

Idioma originalInglés
Título de la publicación alojadaMethodologies and Applications for Chemoinformatics and Chemical Engineering
EditorialIGI Global
Páginas322-427
Número de páginas106
ISBN (versión digital)9781466640115
ISBN (versión impresa)1466640103, 9781466640108
DOI
EstadoPublicada - 31 may. 2013
Publicado de forma externa

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